Using Stata with PHASE and Haploview: Commands for importing and exporting data
| dc.creator | Huber Jr., J. Charles | |
| dc.date | 2017-04-01T19:33:29Z | |
| dc.date.accessioned | 2026-07-09T07:32:27Z | |
| dc.description | Modern genetics studies require the use of many specialty software programs for various aspects of the statistical analysis. PHASE is a program often used to reconstruct haplotypes from genotype data, and Haploview is a program often used to visualize and analyze single nucleotide polymorphism data. Three new commands are described for performing these three steps: 1) exporting genotype data stored in Stata to PHASE, 2) importing the resulting inferred haplotypes back into Stata, and 3) exporting the haplotype/single nucleotide polymorphism data from Stata to Haploview. | |
| dc.identifier | Other:st0199 | |
| dc.identifier | doi:10.22004/ag.econ.159025 | |
| dc.identifier | https://ageconsearch.umn.edu/record/159025/files/sjart_st0199.pdf | |
| dc.identifier | http://ageconsearch.umn.edu/record/159025 | |
| dc.identifier.uri | http://hdl.handle.net/123456789/589453 | |
| dc.language | eng | |
| dc.publisher | ||
| dc.source | http://ageconsearch.umn.edu/record/159025 | |
| dc.title | Using Stata with PHASE and Haploview: Commands for importing and exporting data | |
| dc.type | Text |