BrAPI - an application programming interface for plant breeding applications

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dc.creatorSelby, Peter
dc.creatorAbbeloos, Rafael
dc.creatorBacklund, Jan Erik
dc.creatorBasterrechea Salido, Martin
dc.creatorBauchet, Guillaume
dc.creatorBenites-Alfaro, Omar E
dc.creatorBirkett, Clay
dc.creatorCalaminos, Viana C
dc.creatorCarceller, Pierre
dc.creatorCornut, Guillaume
dc.creatorVasques Costa, Bruno
dc.creatorEdwards, Jeremy D
dc.creatorFinkers, Richard
dc.creatorYanxin Gao, Star
dc.creatorGhaffar, Mehmood
dc.creatorGlaser, Philip
dc.creatorGuignon, Valentin
dc.creatorHok, Puthick
dc.creatorKilian, Andrzej
dc.creatorKönig, Patrick
dc.creatorLagare, Jack Elendil B
dc.creatorLange, Matthias
dc.creatorLaporte, Marie-Angélique
dc.creatorLarmande, Pierre
dc.creatorLeBauer, David S
dc.creatorLyon, David A
dc.creatorMarshall, David S
dc.creatorMatthews, Dave
dc.creatorMilne, Iain
dc.creatorMistry, Naymesh
dc.creatorMorales, Nicolas
dc.creatorMueller, Lukas A
dc.creatorNeveu, Pascal
dc.creatorPapoutsoglou, Evangelia
dc.creatorPearce, Brian
dc.creatorPerez-Masias, Ivan
dc.creatorPommier, Cyril
dc.creatorRamírez-González, Ricardo H
dc.creatorRathore, Abhishek
dc.creatorRaquel, Angel Manica
dc.creatorRaubach, Sebastian
dc.creatorRife, Trevor
dc.creatorRobbins, Kelly
dc.creatorRouard, Mathieu
dc.creatorSarma, Chaitanya
dc.creatorScholz, Uwe
dc.creatorSempéré, Guilhem
dc.creatorShaw, Paul D
dc.creatorSimon, Reinhard
dc.creatorSoldevilla, Nahuel
dc.creatorStephen, Gordon
dc.creatorSun, Qi
dc.creatorTovar, Clarysabel
dc.creatorUszynski, Grzegorz
dc.creatorVerouden, Maikel
dc.date2019-10-15
dc.date2019-09-30T13:13:25Z
dc.date2019-09-30T13:13:25Z
dc.date.accessioned2026-06-27T13:49:49Z
dc.descriptionModern genomic breeding methods rely heavily on very large amounts of phenotyping and genotyping data, presenting new challenges in effective data management and integration. Recently, the size and complexity of datasets have increased significantly, with the result that data is often stored on multiple systems. As analyses of interest increasingly require aggregation of datasets from diverse sources, data exchange between disparate systems becomes a challenge. RESULTS: To facilitate interoperability among breeding applications, we present the public plant Breeding Application Programming Interface (BrAPI). BrAPI is a standardized web service Application Programming Interface (API) specification. The development of BrAPI is a collaborative, community-based initiative involving a growing global community of over a hundred participants representing several dozen institutions and companies. Development of such a standard is recognized as critical to a number of important large breeding system initiatives as a foundational technology. Â The focus of the first version of the API is on providing services for connecting systems and retrieving basic breeding data including germplasm, study, observation, and marker data. A number of BrAPI-enabled applications, termed BrAPPs, have been written, that take advantage of the emerging support of BrAPI by many databases
dc.formatapplication/pdf
dc.identifierhttps://hdl.handle.net/10568/103792
dc.identifier.urihttp://hdl.handle.net/123456789/67076
dc.languageen
dc.publisherOxford University Press
dc.rightsOpen Access
dc.sourceSelby, P.; Abbeloos, R.; Backlund, J.E. (et al.) BrAPI - an application programming interface for plant breeding applications. Bioinformatics, btz190. ISSN: 1367-4803
dc.subjectplant breeding
dc.subjectgenomics
dc.subjectdata
dc.subjectdata management
dc.subjectdatabases
dc.subjectinteroperability
dc.titleBrAPI - an application programming interface for plant breeding applications
dc.typeJournal Article

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