AgBioData consortium recommendations for sustainable genomics and genetics databases for agriculture

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dc.creatorHarper, L.
dc.creatorCampbell, J.
dc.creatorCannon, Ethalinda K.S.
dc.creatorJung, S.
dc.creatorPoelchau, M.
dc.creatorWalls, R.
dc.creatorAndorf, C.
dc.creatorArnaud, Elizabeth
dc.creatorBerardini, T.Z.
dc.creatorBirkett, Clay L.
dc.creatorCannon, S.
dc.creatorCarson, J.
dc.creatorCondon, B.
dc.creatorCooper, Laurel D.
dc.creatorDunn, N.
dc.creatorElsik, C.G.
dc.creatorFarmer, A
dc.creatorFicklin, S.P.
dc.creatorGrant, D.
dc.creatorGrau, E.
dc.creatorHerndon, N.
dc.creatorHu, Z.L.
dc.creatorHumann, J.
dc.creatorJaiswal, P.
dc.creatorJonquet, C.
dc.creatorLaporte, Marie-Angélique
dc.creatorLarmande, Pierre
dc.creatorLazo, G.
dc.creatorMcCarthy, F.
dc.creatorMenda, N.
dc.creatorMungall, C.J.
dc.creatorMuñoz Torres, Mónica Cecilia
dc.creatorNaithani, S.
dc.creatorNelson, R.
dc.creatorNesdill, D.
dc.creatorPark, C.
dc.creatorReecy, J.
dc.creatorReiser, L.
dc.creatorSanderson, Lacey-Anne
dc.creatorSen, T.Z.
dc.creatorStaton, M.
dc.creatorSubramaniam, S.
dc.creatorTello-Ruiz, M.K.
dc.creatorUnda, V.
dc.creatorUnni, D.
dc.creatorWang, L.
dc.creatorWare, D.
dc.creatorWegrzyn, J.
dc.creatorWilliams, J.
dc.creatorWoodhouse, M.T.
dc.creatorYu, J.
dc.creatorMain, D.
dc.date2018-01-01
dc.date2019-04-16T13:02:47Z
dc.date2019-04-16T13:02:47Z
dc.date.accessioned2026-06-27T13:48:51Z
dc.descriptionThe future of agricultural research depends on data. The sheer volume of agricultural biological data being produced today makes excellent data management essential. Governmental agencies, publishers and science funders require data management plans for publicly funded research. Furthermore, the value of data increases exponentially when they are properly stored, described, integrated and shared, so that they can be easily utilized in future analyses. AgBioData (https://www.agbiodata.org) is a consortium of people working at agricultural biological databases, data archives and knowledgbases who strive to identify common issues in database development, curation and management, with the goal of creating database products that are more Findable, Accessible, Interoperable and Reusable. We strive to promote authentic, detailed, accurate and explicit communication between all parties involved in scientific data. As a step toward this goal, we present the current state of biocuration, ontologies, metadata and persistence, database platforms, programmatic (machine) access to data, communication and sustainability with regard to data curation. Each section describes challenges and opportunities for these topics, along with recommendations and best practices.
dc.formatapplication/pdf
dc.identifierhttps://hdl.handle.net/10568/100809
dc.identifier.urihttp://hdl.handle.net/123456789/66552
dc.languageen
dc.publisherOxford University Press
dc.rightsOpen Access
dc.sourceHarper, L.; Campbell, J.; Cannon, E.; Jung, S.; Poelchau, M.; Walls, R.; Andorf, C.; Arnaud, E.; Berardini, T.Z.; Birkett, C.; Cannon, S.; Carson, J.; Condon, B.; Cooper, L.; Dunn, N.; Elsik, C.G.; Farmer, A.; Ficklin, S.P.; Grant, D.; Grau, E.; Herndon, N.;, Hu, Z.L.; Humann, J.; Jaiswal, P.; Jonquet, C.; Laporte, M-A.; Larmande, P.; Lazo, G.; McCarthy, F.; Menda, N.; Mungall, C.J.; Munoz-Torres, M.C.; Naithani, S.; Nelson, R.; Nesdill, D.; Park, C.; Reecy, J.; Reiser, L.; Sanderson, L.A.; Sen, T.Z.; Staton, M.; Subramaniam, S.; Tello-Ruiz, M.K.; Unda, V.; Unni, D.; Wang, L.; Ware, D.; Wegrzyn, J.; Williams, J.; Woodhouse, M.; Yu, J.; Main, D. (2018) AgBioData consortium recommendations for sustainable genomics and genetics databases for agriculture. Database vol. 2018, bay088. ISSN: 1758-0463
dc.subjectdatabases
dc.subjectdata
dc.subjectaccess to information
dc.subjectdata collection
dc.subjectdata management
dc.subjectagricultural research
dc.subjectinformation systems
dc.titleAgBioData consortium recommendations for sustainable genomics and genetics databases for agriculture
dc.typeJournal Article

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