Multiple Structures - Selected Parameter (MSSP) 2D Plot.
| dc.contributor | GORAN NESHICH, CNPTIA. | |
| dc.creator | NESHICH, G. | |
| dc.date | 2011-07-26T01:04:03Z | |
| dc.date | 2011-07-26T01:04:03Z | |
| dc.date | 2011-02-09 | |
| dc.date | 2010 | |
| dc.date | 2020-01-24T11:11:11Z | |
| dc.date.accessioned | 2026-07-07T04:12:45Z | |
| dc.description | The Multiple Structures - Single Parameter 2D module allows a user to compare, in a simple yet intuitive 2D plot, any one of the 150 different sequence, structure, function and stability parameters / descriptors, stored in STING_DB, for any protein structure deposited in the PDB. The 2D plot shows (for a selected parameter / descriptor) the numerical values in the Y-axis and the sequence residue numbers for structurally aligned proteins, in the X-axis. The MSSP module is a part of the improved Blue Star STING protein structure analysis computer interface and DB (which contains per-residue-reported descriptors (available for display both numerically and graphically) for either the public protein data base (the PDB)) or local files. The MSSP allows a user to select a parameter and to compare its values at corresponding 3d location in structurally aligned proteins. As a consequence, a user may observe / compare characteristics of nano-environment within macromolecular 3D constellation. A user may also evaluate how good is the 3D alignment based on synchrony in physical chemical characteristics of corresponding 3D locations in proteins previously aligned structurally. http://www.cbi.cnptia.embrapa.br/SMS/ | |
| dc.description | T25. VIZBI 2010. | |
| dc.format | 2 p. | |
| dc.identifier | In: EMBO WORKSHOP ON VISUALIZING BIOLOGICAL DATA, 2010, Germany. Posters. | |
| dc.identifier | http://www.alice.cnptia.embrapa.br/alice/handle/doc/876488 | |
| dc.identifier.uri | http://hdl.handle.net/123456789/454254 | |
| dc.language | eng | |
| dc.rights | openAccess | |
| dc.subject | Sting | |
| dc.subject | Estrutura de proteínas | |
| dc.subject | Protein structure | |
| dc.title | Multiple Structures - Selected Parameter (MSSP) 2D Plot. | |
| dc.type | Resumo em anais e proceedings |