Genotyping-by-sequencing (GBS) dataset for 185 accessions of buffel grass (<em>Cenchrus ciliaris</em>)

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dc.creatorNegawo, Alemayehu T.
dc.creatorJones, Chris
dc.date2024-02-26T13:08:52Z
dc.date2024-02-26T13:08:52Z
dc.date.accessioned2026-06-27T16:49:03Z
dc.descriptionThis dataset presents 7,506 SNP markers (genotype calls "0", "1" and "2) and 8,345 silicoDArT markers (presence/absence, calls "0" and "1), each on 185 accessions of <em>Cenchrus ciliaris</em>, aka. buffel grass (csv list attached). In both xlsx files, missing genotype calls are encoded "-". SNP calls are encoded as follows: 0 = homozygote in the reference allele, 1 = homozygote in the alternative (SNP) allele, 2 = heterozygote. This GBS information pertains to buffel grass i.e. <em>Cenchrus ciliaris</em> (aka. <em>Pennisetum ciliare</em>), but any mapping information, when present, relates the markers to <em>Setaria italica</em> (foxtail millet) in the "Setaria_italica_v2.0" genome assembly of its Yugu1 strain, with INSDC identifier GCA_000263155.2.
dc.identifierhttps://hdl.handle.net/10568/139656
dc.identifier.urihttp://hdl.handle.net/123456789/134016
dc.languageen
dc.relationhttps://doi.org/10.3390/agriculture14020257
dc.relationhttps://doi.org/10.3390/d12030088
dc.rightsOpen Access
dc.sourceNegawo, A.T. and Chris, J. (26/2/2024). Genotyping-by-sequencing (GBS) dataset for 185 accessions of buffel grass (<em>Cenchrus ciliaris</em>) [Genotyping-by-sequencing (GBS) dataset].
dc.subjectgenotyping-by-sequencing
dc.subjectbuffel grass (cenchrus)
dc.subjectbuffel grass (cenchrus ciliaris l.)
dc.subjectdartseq markers
dc.subjectdartseq analysis
dc.titleGenotyping-by-sequencing (GBS) dataset for 185 accessions of buffel grass (<em>Cenchrus ciliaris</em>)
dc.typeDataset

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Instituto Internacional de Investigaciones Pecuarias (ILRI)